HLA-IMPUTER:HLA Allele Imputation via population specific HIBAG models
ImputeHLA
Impute
Association
Follow 4 Simple Steps:
1. Upload plink genotypes files in hg19
Choose bed File
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Choose fam file
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Choose bim file
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2. Choose Reference Panel to Use
Han Chinese
Pan Asian
European
Multiethnic
3. Choose Locus to Impute
A
B
C
DRB1
DQB1
DPB1
DQA1
DPA1
4. Impute Alleles
Input Email to receive results
5. Load Data
Downloads
Download Manual
Link to Our Paper
Download Han Chinese HIBAG Models
Download Test Dataset
Preview of Genotypes Loaded
Predicted Alleles
Best Predicted HLA Alleles
Posterior Probabiilties Of All HLA Alleles
Download Best Predicted
Download All Predicted
Upload phenotype data for association in tab delimited format
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Download sample association text
Do you want to upload your own imputed HLA alleles? The default is to use the prediction from previous step
Best alleles
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Posterior probability cutoff
Select dominant, additive or recessive
Dominant
Additive
Recessive
Use posterior probability of imputation in association analysis?
Yes
No
Download Allelic Association Result
Download Predicted Amino Acid Sequences
Download Amino Acid Association Result